Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931240.1_cds_XP_016478085.1_69755
CDS Infomation

[gene=LOC107799473] [db_xref=GeneID:107799473] [protein=protein EFR3 homolog] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016478085.1] [location=complement(join(<2319..2447,2620..2760,3732..3932,4094..4221,4475..4550,5092..5241,5342..5701,5792..5941,6907..7199,7274..7470,7567..7772,7872..7919,9102..9230,9729..9843,13250..13365,13456..13530,13606..13740))] [gbkey=CDS]
Sequence

ATGGGGGTGATGTCAAGGAAAGTAGTGCCAGCATGTGGTAATCTCTGCTTCTTTTGCCCA
TCATTGCGCGCAAGGTCCAGACAGCCTGTTAAACGCTACAAGAAGCTCCTTGCTGAGATT
TTCCCCAAATCACAGGATGCTGAGCCAAATGATAGAAAGATTGCCAAACTTTGCGAGTAT
GCTTCCAAAAACCCTTTCCGCATTCCTAAGATTACTGAATACCTGGAGCAAAGGTGTTAC
AAAGATTTGCGAAATGAGCACCTTGGCTCCGTAAAGGTTGTTACCGTCATCTACAGGAAG
CTGCTATCTTCATGTAAGGAGCACATGCCACTATATGCTACTAGTCTATTGGGGATTATC
CGCACTCTTTTTGAACAGACGCAGCATGATGAGATGCAGATTTTAGGTTGCAACACTCTC
GTCGACTTCATCAATTGCCAGATGGATGGTACGTATATGTTCAACTTAGAAGGCCTTATA
CCTAAAATGTGTCAACTAGCTCGAGAAATTGGAGATGATGGCAGAGCCCTGCGCTTGCGG
TCTGTAGGAATGCAAACTCTGGCTGTCTTGGTGTGGTTTATGGGGGAGCAGTCCCACATC
TCCATGGACTTCGATCATATTATCACTGCGACTTTGGAGAACTACATTACTTTCACAGTG
AACCTAGAGAATGGCAGACAAGATGGTAAACAATCTCAACCTGAACAGTGGATTCAAGGA
GTGTTGAACAGTGACGATCACAGCTCATCTTTCCCTGATATGAGCAAGAAGGTTTCCTCC
TTGCCAAATATCATGAATGCAGATATAAAATTGACATCCTCAATAGAAACAACCAAAAGC
CCCTCTTATTGGGCCAGAATTTGCTTACGTAACATGGCCTTACTGACAAAAGAAGCGACT
AGTGTACGGCGGGTTCTTGAACCTCTTTATCATTGTTTTGACACTGAAAACTATTGGGCT
TCAGAGAAAGGACTCGCCTGCTCAGTGCTCATGGATTTGCAGTGCTTGTTAGAGGAATCA
GGTGAGAATTCCCATTTGTTGCTATCCATCTTGGTCAAGCACTTGGATCATAAGAACATT
GTCAAGCAGCCTGACATACAGATTAGTATAGTTAATGTGGTCACACACTTGGCAGAAAAT
GCAAAAGAGCAAGCTTCCACTACAATAGTTGGTGTCATTAGTGACCTGATTAAGCATTTA
ATGAAGTGCATGCAGTATTCAGCTGAAGCATCTAGTTCGAAAGACAGATTAGATAATTCT
AACTCCAATCTTCAGTCTGCCTTAGAGAGGTGTATATTACAGCTCTCAAATAAGGTTGCT
GATATGGGGCCTATACTTGATATGATGGGCATGGTGCTAGAGAACATTCCAGCGAGCATC
GTGGCAGCTAGAACAATGATTGCCGTTGTGTATCGCACAGCACAAATTGTCTCTTGCATT
CCTAATGTGTCATATTACAGGAAGGCTTTTCCAGATGCCCTCTTTCACCACTTGCTCTTG
GCGATGGCACACACTGACCATGAAACACGAGCTGGAGCACACCATATATTCTCCACTGTG
CTTATGGCACCTGTCAGTCACTTGTTATCTCTACATAGTAGAAATTTTTCCCAGGGTATT
CTAGTCCAATCACCAAGGAAGTTGGCTAAGGTGAGAACTAAGAGTTTCTCCATTCAAAAT
GGAAACACAGATGAAAATGGTTCCAGAGATGGAGAAGTGGGAGAAGAAAATGAAGATGTC
AGTCGCCATTCACATCAATCTGCTGATTCTCGATCTCGAAGTCAATCCTGTAGCTTCAAG
GATGCTCTCCCTGATAGGAAACCAGATCTCACTTCACTTCGGTTGAGTAGTCACCAAATG
AGTCTTCTGCTTTCATCTATCTGGGTTCAGGCAACACTGACTGATAATACACCTTCCAAT
TTTGATGCGATGGCCCATACATACAAAATTGTGTTACTTTTCAGTCGATCAAAGAATTCT
AGTCACATGGCGCTTGTTCGATCTTTTCAGTTAGCCTTCTCTCTGAGGAGTATTTCGATG
GATAGAGAAGGAGGTTTACAACCATCTAGAAGAAGGTCTCTATTTACTTTGGCATCATAT
ATGCTCATCTGTTCAGCAAGGGCGGGAAGTCTCCCTGAACTAATTCGTGTGGTTGAATCA
TCACTGACAGACGAAATGGTTGATCCTTATCTTAAGTTGGGTGAAGATGTCAGGCTGCAA
GCTGCATCTGAAGCATCTGGTAGCGAAGCATATGGTTATGGGTCACCGGAAGATGAAATT
GCAGCTTTGAAATCCTTGTCAGCAGTAGAATTAGATGATGAGAAATTTAAAGAAATCATT
ATGTTGCACTTCACAACTAAATGCAGAACATTGTCAGAGGATGAGTTATCAAGCATAAGA
AAACAACTCTTGGAAAGGTTTGAACCAGACGATGCATATCCACTTGGAATTCCTTTGTAT
ATGGAAACACCTCACCCCTGCTCTCCACTTGCTCAGATTGAGTTTGAGACTTTTGATGAG
GTCATGGCACCTCCTTCCCTCATAGATGAAGAAGCAATTTCAGATGCTAATGGAAGCCAA
TCAGGTCGAAAGACCTCTCTTTCCATCAATTCCCTTGACATTCTAAGTGTGAACCAGCTT
TTAGAATCG

Peptide Sequence

PEP ID

XP_016478085.1
PEP Infomation

PREDICTED: protein EFR3 homolog [Nicotiana tabacum]
Sequence

MGVMSRKVVPACGNLCFFCPSLRARSRQPVKRYKKLLAEIFPKSQDAEPNDRKIAKLCEY
ASKNPFRIPKITEYLEQRCYKDLRNEHLGSVKVVTVIYRKLLSSCKEHMPLYATSLLGII
RTLFEQTQHDEMQILGCNTLVDFINCQMDGTYMFNLEGLIPKMCQLAREIGDDGRALRLR
SVGMQTLAVLVWFMGEQSHISMDFDHIITATLENYITFTVNLENGRQDGKQSQPEQWIQG
VLNSDDHSSSFPDMSKKVSSLPNIMNADIKLTSSIETTKSPSYWARICLRNMALLTKEAT
SVRRVLEPLYHCFDTENYWASEKGLACSVLMDLQCLLEESGENSHLLLSILVKHLDHKNI
VKQPDIQISIVNVVTHLAENAKEQASTTIVGVISDLIKHLMKCMQYSAEASSSKDRLDNS
NSNLQSALERCILQLSNKVADMGPILDMMGMVLENIPASIVAARTMIAVVYRTAQIVSCI
PNVSYYRKAFPDALFHHLLLAMAHTDHETRAGAHHIFSTVLMAPVSHLLSLHSRNFSQGI
LVQSPRKLAKVRTKSFSIQNGNTDENGSRDGEVGEENEDVSRHSHQSADSRSRSQSCSFK
DALPDRKPDLTSLRLSSHQMSLLLSSIWVQATLTDNTPSNFDAMAHTYKIVLLFSRSKNS
SHMALVRSFQLAFSLRSISMDREGGLQPSRRRSLFTLASYMLICSARAGSLPELIRVVES
SLTDEMVDPYLKLGEDVRLQAASEASGSEAYGYGSPEDEIAALKSLSAVELDDEKFKEII
MLHFTTKCRTLSEDELSSIRKQLLERFEPDDAYPLGIPLYMETPHPCSPLAQIEFETFDE
VMAPPSLIDEEAISDANGSQSGRKTSLSINSLDILSVNQLLESVLESARQVVNFPLSSTP
IPYDQVKNQCEALVTGKQHKMSALQSFKMQQETKALLSYNAMDRKSPSLPKMDTELHQDL
QLAVVESAHSQNSLSCSREYGQESFRLPPSSPYDKFLKAAGC

Transcript Sequence

Gene sequence data has not been registered.